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Model Fern Reveals Insight into DNA Thievery in Ferns
… a genome duplication event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and … Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has set … over seven million repetitive elements that account for 85.2% of the C-fern assembly. While they did identify a …
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JGI@25: Building a Better Bean
… of the common bean. That work was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a … iron content and have a longer shelf-life — up to four years. Work is now underway to transfer the trait into other …
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JGI@25: Studying Sorghum’s Survival Skills
… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … team studied sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC Kearney …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… space that has resulted in many impactful papers in recent years, but are also looking forward to jointly expanding …
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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … work was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE …
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An Automated Tool for Assessing Virus Data Quality
This work was also supported the grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from FAPESP. … CheckV on IMG/M Data portal … …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… … This work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, … Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Germany. The BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with … samples in a previous study. The team analyzed over 80,000 biosynthetic gene clusters (BGCs) for synthesis of …
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JGI@25: The Little Alga That Could
… those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … Cole and their team found over 1,000 upregulated genes, 188 of which were shared with previous studies in the same …
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SPRUCE-ing Up Science
PhD dissertation defense presentations and beyond. In 2018, a friend of his wife’s passed along an open postdoc … your point across as quickly as possible,” he said. After years of practice presenting his science and learning what … . New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …
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