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JGI@25: Fueling Investigation into Methane-Making Microbes
… a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department …
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JGI@25: Using Team Science to Build Communities Around Data
… for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these initial efforts: Spatafora and … has “significantly advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic …
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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … ecotypes dwell in the sunlit upper waters (above 200 m, or 656 ft), and have genes to support a photoheterotrophic …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… following a genome duplication event that occured some 60 million years ago. Massive gene loss, rampant gene duplications, and … (NSF; grant PRFB IOS-1907220 to D.B.M.; grant MCB-1856143 to R.J.S.; grant DEB-1911459 to P.G.W.; grant …
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JGI@25: Building a Better Bean
Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to darken. Called … iron content and have a longer shelf-life — up to four years. Work is now underway to transfer the trait into other …
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JGI@25: Studying Sorghum’s Survival Skills
… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … team studied sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… space that has resulted in many impactful papers in recent years, but are also looking forward to jointly expanding …
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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from … and by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for RNAseq). The work at the Joint …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … the microbes in and on humans shape our health. A total of 16 projects have been approved, divided among the following … The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and Roux, …
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An Automated Tool for Assessing Virus Data Quality
… on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both … This work was also supported the grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and … and the Environmental Molecular Sciences Laboratory (grid.436923.9), which are DOE Office of Science User Facilities. … under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). …
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