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JGI@25: Cow Rumen and the Early Days of Metagenomics
… data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified …
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Training the Next Generation of Talent
… of California, Merced to start orientation as a first-year graduate student in the Quantitative Systems Biology … I’ll take that knowledge back with me.” Now a second-year evolutionary biology student in David Ardell’s lab, he … that’s going to be generated at academic level in a few years as it’s getting closer to producing trillion base data …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the … a variety of methane-mitigation goals. One aim is identifying chemical compounds that could inhibit microbial … approach is using the Hungate1000 collection to identify microbial markers that would allow farmers to screen …
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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …
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David Goodstein
… et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus … mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene Atlas: an …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh ra-MOR-um) the genus in Latin translates to … University, was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … disease and how to control them. Despite advances in the years since this landmark publication, SOD continued to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple … of his lab, Abigayle Simpson. They found that although 20 years of SIP experiments have generated plenty of insights, …
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Access to Rock Star Scientists
… done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
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A Social Science Experience
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics call for proposals . The proposal call is open year-round, but proposals submitted by July 30 will be … Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the …
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JGI@25: Stories from Intern Alumni
… solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …
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