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… data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on …

… of California, Merced to start orientation as a first-year graduate student in the Quantitative Systems Biology … I’ll take that knowledge back with me.” Now a second-year evolutionary biology student in David Ardell’s lab, he … that’s going to be generated at academic level in a few years as it’s getting closer to producing trillion base data …

Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team … Having a better handle on the gene function helps identify the molecular targets for plant improvement. … a subscriber? Avinash: It has been publicly available since 2018. There were more than 15 citations even before this was …

… cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related … by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore Foundation grant …

Director’s Award for Exceptional Scientific Achievement 2017-  Adjunct Professor UC-Berkeley 2015-  Co-Chair, “Advances …

… mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene Atlas: an … copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant Pan-Genomics Comes of Age . Annual Review of Plant Biology 72, 411. Gordon et al., 2020.  Gradual polyploid genome …

… diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh ra-MOR-um) the genus in Latin translates to … disease and how to control them. Despite advances in the years since this landmark publication, SOD continued to … and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of …

… to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple … of his lab, Abigayle Simpson. They found that although 20 years of SIP experiments have generated plenty of insights, …

… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across … The work is supported by NIH Common Fund grant 1U24HL175772-01. This is not the first time Kyrpides and his …

… seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the … these plant genome sequences also led researchers to identify a gene related to seed dispersal in wild populations for … it leads to reduced harvest yields. Over thousands of years, farmers have selected for cereal plants without this …

… 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has …

… the authors who offer perspectives on what the next five years of innovation could look like. In one article, … ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. As the … studying virus-host dynamics in nature. In the last few years, mapping the planet’s viral diversity has advanced …