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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … a Nature Communications paper that builds off their early collaborations that could help crop breeders and … tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes that …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of … the larger research community a means to access microbial lineages from a variety of environments. In 2017, the first …
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Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass
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Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes
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Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms
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Divergent selection and climate adaptation fuel genomic differentiation between sister species of Sphagnum (peat moss).
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the … sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria and Saganbacteria that diverged …
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Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence
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