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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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Systems Metabolic Engineering of Escherichia coli Improves Coconversion of Lignocellulose‐Derived Sugars
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Adaptive laboratory evolution for improved tolerance of isobutyl acetate in Escherichia coli
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High-density CRISPRi screens reveal diverse routes to improved acclimation in cyanobacteria.
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is impacting these marine communities,” said Mock. The greenhouse gas carbon dioxide (CO2), produced from the …
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PhycoCosm, a comparative algal genomics resource
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 … have cited that genome. Since publishing that original reference genome, the JGI has also continued to collaborate …
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JGI@25: From Life at the Extremes to Editing Genomes
… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …
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Effects of Polar Light Cycle on Microbial Food Web
… has been well-studied by many researchers for nearly five decades. In these frigid systems, where organisms higher up … there is a strong chemical and salinity gradient — and green sulfur bacteria,  Chlorobium , blooms. The specific … Preliminary observations regarding the contributions of algae and viruses to the ecosystem were noted, but require …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the … The single cell was isolated from the bacteriome of the green sharpshooter Draeculacephala minerva bacteriome, …
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
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