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… By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … Virophage data on IMG/M data portal …

… his team then linked those species-level observations with data on microalgal communities across different ocean … from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing … The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the …

… Rauer Islands. Additionally, they compared metagenome data generated from samples collected at four Rauer lakes to … level genomic variation. The genome and metagenome data are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers to define a haloarchaea …

… Database provides details on river microbes in 90% of US … Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering … The 3.8 trillion bases or Terabases of sequencing data, along with geochemical and geospatial measurements …

… the study of giant viruses.  Kyrpides and the JGI’s IMG/M Data Portal were instrumental to  a study that looked into … also contributed to an update of  the JGI’s Genome OnLine Database (GOLD ) database that also marked the platform’s … for cassava are available on the JGI plant portal Phytozome.     …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive …

… , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome … being monitored and the team plans to continue collecting data to understand the ERD process.  … View the Dataset on IMG/M data portal … Datasets …

… is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze these data are diverse and porting these codes to GPUs present …

… by a fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. …

… find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect … of switchgrass is available on the JGI plant data portal  Phytozome . This version can help breeders identify genomic …

… for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …

… that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … and … that was really the foundation for many of the tools that are available these days and that are widely used … actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate …