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… trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA … all of this information. The JGI aims to create pipelines, tools and other standardized data resources that the global … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to … a fruitful experience for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI data portal MycoCosm . They looked for genes known to be involved …

… Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP … strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. … et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for …

… cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the …

… for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …

… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to …