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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and … before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a …
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Special Initiatives & Programs
… and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on an …
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ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria
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Kjiersten Fagnan
… flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was … of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. …
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PR-PR: Cross-Platform Laboratory Automation System
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact … Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, …
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Development of a Recombineering System for the Acetogen Eubacterium limosum with Cas9 Counterselection for Markerless Genome Engineering
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Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi.
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Natural Prodcast Episode 21: Elizabeth Parkinson
… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get …
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