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Calculating the Costs of Multiple Switchgrass Gene Copies
… potential for habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel … in breeding efforts, and also because 8X switchgrass is generally thought to harbor less genetic and phenotypic …
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JGI@25: From Life at the Extremes to Editing Genomes
… refine and improve the process of finding novel Cas genes and CRISPR systems. The collaboration has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction …
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … where data are available, a user can also analyze gene expression from published experiments; study DNA … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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Webinar: Introducing the BioSANS capability
… Washington University in St. Louis on “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, … Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Gene duplication and genetic innovation in cereal genomes
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Patterns and drivers of fungal community depth stratification in Sphagnum peat
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
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Host genotype controls ecological change in the leaf fungal microbiome
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Fungal diversity and function in metagenomes sequenced from extreme environments
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality …
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