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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … hosts. In doing so, they influence ecosystem-level nutrient cycling and carbon storage. For example, the marine algae  Emiliania … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria Nature Communications …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … data, open to all researchers. Book a session via the appointment calendar for technical help, feedback or a guided …
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The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and … within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole “on-time thing” a habit! I’m really not good at that, you guys. I’m …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI supports the entire data life cycle through resources including the JGI portals, and our broader data ecosystem. …
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