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… achievements in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice … JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best … multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …

… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … process tough cell walls.  “The JGI was really leading the development of these approaches that are still vital to … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …

… Learn more about PhycoCosm, the largest interactive collection of … tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …

… to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … scores of nurseries across the nation, elevating concerns about the pathogen to an all-time high. California … with the right tools to track infection. The parallel development of the SODmap Mobile app enabled SOD Blitz …

… JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For … has been that. That person needs establish the culture of workforce safety and diversity and working together and … is still good. “I noticed right away,” said Ellen Ford about Ray’s personal impact on her, “that you started …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … of the microbial communities in the environmental samples without needing to isolate individual organisms, using … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode …

… Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …

… in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for … Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at … at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome …

… The Science In a recent Microbiome paper , scientists focused on the conifer needle microbiome. The phyllosphere, … pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey showed what … land and the atmosphere. Microbes living there can interact with chemical defenses of plants and influence nutrient …

… detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … influence, and are influenced by microbial partners. We use a variety of genomics-powered tools to study this … and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of bacterial …