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CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) … your proposal idea with JGI staff to clarify key points about JGI’s capabilities, technical feasibility, and … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

… her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and … at Berkeley Lab. Dr. Chen is currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of the Integrated Microbial Genomes (IMG) …

… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … of years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really … complexes that work like assembly lines for efficiency.  In 2021, her team saw that four strains of anaerobic fungi …

Learn more about PhycoCosm, the largest interactive collection of … tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …

… ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … researchers have been able to gain further insights about how microbes have adapted to thrive in polar … Nanohaloarchaeota were predicted to be capable of autonomous growth because they had larger genome sizes and their …

Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …

… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but … To access the genomes of uncultured  microbes , scientists usually employ two different methods; shotgun metagenomic … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …

… method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort … a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … Roux outlines what’s been achieved thus far based on computational predictions, and future directions integrating …

Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …