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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … a diverse range of topics related to structural biology, single cell and systems biology, omics, and big data science, …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours …
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Matt Blow
… on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. …
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Building Sphagnum Genomic Resources
Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … and climate is estimated to be larger than any other single plant genus. Peatlands accumulate partially … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … bp) that directs the endonuclease where to cut, but these “single guide” RNAs (sgRNAs) can be faulty. Without a good …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has … FastTree and identified 62 distinct AT groups. However, no single AT group was conserved across all species — a …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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