Search

… The purpose of this policy is to establish communication norms around … their work, while also adhering to the authorship policies of the journal in which the research is published. The JGI … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase …

… biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In …

… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was …

… only able to clearly identify what falls within that single beam. When it comes to microbial communities, … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem …

… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … one DOE Office of Science National User Facilities in a single project. …

… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …