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A Step Toward Controlling Soybean Rust
… , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better …
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Multiple whole-genome alignments without a reference organism
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … Adaptive …
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JGI@25: Roots of a Mutualist Relationship
… challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … from looking at single organisms to applying a broader ecosystem perspective, involving more multidisciplinary … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were …
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Genomic and Metabolic Diversity of Marine Group I Thaumarchaeota in the Mesopelagic of Two Subtropical Gyres
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Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09
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Metagenome-assembled genomes reveal unique metabolic adaptations of a basal marine Thaumarchaeota lineage
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