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JGI Early Career Researchers Featured in mSystems Special Issue
… to reconstruct individual microbes in an environmental sample beyond the tried-and-true method of traditional … microbes. A comprehensive map of viruses including host information, Roux says, would be the foundation upon which … Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   …
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Synthetic Biology Informatics Group
… Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well …
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Plant Microbial Interactions Group
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … produce antibiotics. Still, the team estimates that genomic information is only available for a fraction of extant … genomes (MAGs) reconstructed from sequenced environmental samples in a previous study. The team analyzed over 80,000 …
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How Filamentous Fungi Sense Food
… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (DOE) Joint Genome Institute, a DOE Office of Science User Facility, was supported by the Office of Science of the …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, … in a controlled manner. These advancements allow controlled sample transport for mass spectrometry applications, for … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the … Materials strategic initiative aims to enable the JGI user community to participate in the development and … strains that can synthesize other bio-based materials. For information about licensing the patented osteoyeast for …
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A More Intuitive Phytozome Interface
… been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome … BioMart data warehouse). We are still working out the best protocols to allow us to update PhytoMine and keep it …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence … (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort …
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JGI at the AGU Fall Meeting
… December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … successful proposals: Collaborate With a U.S. DOE User Facility: Learn About Available Expertise and … the map: continental-scale context for thousands of newly sampled microbial genomes from North American watersheds …
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The Power of One, Amplified
… cells from a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add … is single cell genomics, where cells from environmental samples are first separated, and their genomes then … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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