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Crysten Blaby-Haas
… joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … NIH Postdoctoral Researcher, UCLA … Handling Editor, Journal Experimental Botany, 2022 – present  University of …
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Supercharging SIP in the Fungal Hyphosphere
… which means they offer a lot of insights into how plant materials can be broken down for things like biomass and  … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, have … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Micro-Scale Applications Group
Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards to accurately measure … is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and … develop the overall experimental design, sequenced the RNA from nearly 400 root and leaf samples and helped analyze …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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Nikos Kyrpides
… . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … Biotechnol . 39:499-509. Harrington et al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell … University of Thessaloniki (2017) The van Niel International Prize for Studies in Bacterial Systematics …
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Computationally Classifying Fungal Lifestyles
… data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Building Sphagnum Genomic Resources
… (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … by routing the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … half, Visel drove the effort, comprised of holding JGI-internal leadership and planning workshops, as well as … and help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic capabilities …
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Fungus Fuels Tree Growth
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program in … by the DOE Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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Plant-Microbial Interactions Group
… single-cell profiling methods, including single-cell RNA-seq, single-cell ATAC-seq, and spatial transcriptomics … 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… at West Virginia University (WVU), led the study’s international team, which included scientists from Oak Ridge … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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