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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Len Pennacchio
… the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA … Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and … a vision for future technical JGI directions for DOE User science. … Complete Publications Genomic Technologies …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … to get credit for their scientific contributions through data citations, authorship, and presenter opportunities. …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… it makes its sequencing, synthesis, metabolomics and data analyses capabilities available on a peer-reviewed competitive basis via its  User Programs . Q:  Are applicants outside of JGI eligible to …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  …
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Massie S. Ballon
JGI’s strategic vision, the Institute’s staff and user community. … LBNL Biosciences Area Organizational …
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Kjiersten Fagnan
… flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was … Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD Applied Mathematics …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … of biological systems. The JGI strategic plan lays out how users and the global research community will bridge … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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