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Finding the Fermenters
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … by the DOE Biological and Environmental Research (BER) program to enable scientific discovery in support of the DOE … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … metagenomics to sample the entirety of a microbial community out in its natural environment, scientists have … as a principal investigator through the Community Science Program — as well as through the Facilities Integrating …
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A data analysis and coordination center for the human microbiome project
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Earth BioGenome Project: Sequencing life for the future of life
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Genome Initiative in 2018 as part of its Community Science Program. The OGG has set out to generate high-quality genome … life. Ultimately, the resulting comparative framework can inform the efficient production of plant-based biofuels and …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … many statistical tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… computing infrastructure and analysis. This way, JGI users — both primary, data-generating users, as well as … access to high-quality, assembled datasets from all of this information. The JGI aims to create pipelines, tools and … from this sample set through the Community Science Program, it was the largest project the JGI had ever put …
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Cultivating Symbiotic Antarctic Microbes
… they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and … researchers have been able to gain further insights about how microbes have adapted to thrive in polar ecosystems. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that …
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Statement on the Use of Genomics Data
… field of genomics established in  Bermuda (1996-1997) and reinforced by the  Fort Lauderdale Agreement (2003), the JGI … to uploading sequence data generated on behalf of its user community to NCBI as well as to the  data portals that … at the DOE Office of Biological and Environmental Research program. Following these discussions, the JGI will …
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