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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora … California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
Learn more
Characterizing Communities: JGI Announces Latest CSP Portfolio
… Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … the role endosymbiotic bacteria play on mating habits of Mucoromycota fungi, and their effects on these oil-producing … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a … of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data … JGI advisory committees and its primary funders at the DOE Office of Biological and Environmental Research (BER), …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … to living on a changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado … today. I teach a class on ecosystem ecology — and I tell my students, you know, this is not academic. I mean, this is in …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … the energy to make complex compounds called natural products . Yet, combing through the genomes of four anaerobic … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … check the first episode out. This one continues the introductory conversation between myself and Alison, and we … to your cell wall, then the antibiotic, you know, doesn’t affect it anymore. And so all of those antibiotics …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps … gas impacts from all of our operations,” said Brie Fulton, program manager for  Sustainable Berkeley Lab (SBL). By …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … turn affecting environmental and human health, energy production and agriculture. Understanding the compositions of … river microbiome datasets are also available through the DOE Systems Biology Knowledgebase, allowing researchers to …
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JGI Announces 2025 New Investigator Portfolio
… Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … a widening circle of researchers whose work aligns with DOE missions .  Below find a list of researchers whose … of projects, including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … as part of the Marine Microbiology Initiative. She conducted her postdoctoral training in human microbiome research … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have … soils and has a high tolerance of extreme water conditions such as drought and floods. The U.S. Department of Energy (DOE) supports research programs for developing methods for …
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