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Refining the Process of Identifying Algae Biotechnology Candidates
… algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest for use as … Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in … expertise at the National Labs to screen, characterize, sequence and then analyze the genomes and multi-omics …
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Graduate Students Get Thesis Research Opportunity at the JGI
… of genomics and JGI scientists are developing cutting edge technologies to answer our most pressing problems. I’m very … focuses on the roles of microbial communities in wetland carbon cycling and the interactions of plants with their … Rambo will be studying the influence of viruses on carbon cycling in coastal mangroves. The work complements an …
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How to Target a Microbial Needle within a Community Haystack
… The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … the vast majority of microbes that play key roles in global biogeochemical cycles remains unexplored and … of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps …
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2022 Progress Report
…   Mission  The mission of the JGI is to provide the global research community with access to the most advanced …
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact Found on all … sequence the fire moss genomes ran the gamut of sequencing technologies, from making a bacterial artificial chromosome …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… first to dig into a forest floor ecosystem to discover what carbon- and nitrogen-metabolizing enzymes are abundant, and … on and in forest soil also better enriches models of global carbon and nitrogen cycling, both on the ground and … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …
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The Expanding Universe of Methane Metabolisms in Archaea
… Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing … composition of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel … geothermal pool contains high levels of sulfur, methane, carbon dioxide and hydrogen. Inskeep, a longtime JGI …
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Plant Microbial Interactions Group
… and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the … and computational approach, we employ various omics technologies, strain engineering and experimental … single-cell profiling methods, including single-cell RNA-seq, single-cell ATAC-seq, and spatial transcriptomics to …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… foundational science, creating opportunities for the global research community. The U.S. Department of Energy … systems. The JGI strategic plan lays out how users and the global research community will bridge fundamental knowledge … arising from leveraging laboratory and computational technologies at scale, improving connectivity across the DOE …
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Who We Are
… created in 1997 to unite the expertise and resources in DNA sequencing, informatics, and technology development … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … accomplishment, the JGI went on to advance basic science by sequencing scores of microbial species as well as several …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … and quality of fungal gene annotations available to the global research community.  KBase has developed their own …
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