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… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a … to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, a national …

… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. … a scientist with joint appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …

… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on … DOE’s most challenging problems. … PhD Cell Biology. Duke University MS Developmental Biology, Chinese Academy of …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … and user-centered design efforts. … PhD Applied Mathematics University of Washington, Seattle BA Applied Mathematics University of California, Berkeley MBA Haas School of …

Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and surveillance in complex samples. … B.Sc. Biochemistry, University of Applied Sciences Mannheim (Germany) M.Sc. …

Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … approaches. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( …

… technologies (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of the Index of …

Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … more.  … B.E. in Biological Science and Technology, Tokyo University of Science, Japan ( summa cum laude ) Ph.D. in Bioengineering, University of California, Berkeley Postdoctoral training in …

… in their bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical Engineering Post-doctoral …

… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Kunakom S, Otani H, Udwary DW, Doering …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … (Pactolus). … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, Arizona State University … 1. Swift CL, Louie KB, Bowen BP, Olson HM, …

… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … in a pan-genomic context. … BS in Plant Science, Cornell University, NY; PhD in Biology, University of Illinois at Chicago, IL Postdoctoral training, …