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… of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … their environments. Summary The traditional shotgun metagenomics approach to learning more about environmental …

… oil production. The organism uses specific chemical tags on DNA  to control which genes are active. Researchers … T32 Genetics Dissection of Cells and Organisms Grant (1T32GM132022-01) and the Newton Graduate Fellowship in Synthetic …

… Award Numbers DE-AC02-05CH11231, DE-AC02-06CH11357, DE-AC05-00OR22725, and DE-AC02-98CH10886. MICROnet is …

… genomics and transcriptomics to discover another advantage these fungi wield: the capacity to form enzyme …

… some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated … virus reference genomes to search for giant viruses in metagenomic reads. Another approach, single cell methods — … genome, to sift for snippets of giant viruses in metagenomes. This has been useful in marine environments, …

… FY13 Progress Report …

… use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 … microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply getting much …

… and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) directly from sequenced …