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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is … possibilities for scientific exploration, granting access to diverse datasets that deepen our understanding of how …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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From Competition to Cooperation
… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been done … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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A More Intuitive Phytozome Interface
… plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have … a conversation from the first episode . You can go to part 3 here . You can find the podcast on  Apple ,  …
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Accelerating Metagenomics Discoveries with Deep Learning
… are utilizing deep learning to automatically generate insights from metagenomic data. In deep learning, a branch … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural …
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Halophytes and heavy metals: A multi‐omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance
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Thermochemical wastewater valorization via enhanced microbial toxicity tolerance
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
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