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Characterizing Communities: JGI Announces Latest CSP Portfolio
Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on any … with key DOE Office of Biological and Environmental Research (BER) initiatives in bioenergy crop improvement and … for these species, this approach would also allow researchers to learn more about what is and is not …
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Taking Stock of the Known and Unknown Microbial Space
… of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint … hosts, and their environments could be applied to multiple research areas including agriculture, biofuels and …
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2024 Progress Report
… seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … data, and professional expertise to support the global research community in studies of complex biological and … with Berkeley Lab Computing Sciences and NERSC, JGI researchers  more than doubled the number of known protein …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean … study built off earlier approaches and offered a way for researchers to study the planet’s microbial diversity, much … a single bacterial cell (seen here in a glass capillary), researchers sequenced and assembled the first complete …
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iPHoP: A Matchmaker for Phages and their Hosts
… like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever … do. Building on existing virus-host prediction approaches, researchers have created a new program called iPHoP … In building this program,  described in Plos Biology , the research team led by scientists at the U.S. Department of …
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JGI announces second round of 2023 New Investigator awardees
… eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs … Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted …
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Enlarging Windows into Understanding Gene Functions
Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription factors … article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna … O’Malley developed. Unique Capability DAP-seq allows researchers to identify all the sites where transcription …
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Help from Citrus’ Bitter, Hardier Cousin
… go unripened and a blotchy yellowing of leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists … its genetic secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Expanding Virophage Diversity
… in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint … The work also used resources of the National Energy Research Scientific Computing Center (NERSC) , which is … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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When “The Blob” Made It Hotter Under the Water
… on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … samples collected before, during and after The Blob, researchers developed a preliminary model of how marine … by warming events. More time-series studies could help researchers improve predictive models on how climate change …
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JGI announces 2024 Functional Genomics awardees
… accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information … and genome function. Tapping into these functions allows researchers to use them for engineering applications in … efficient biotechnologies.  Below find a list of the nine researchers accepted for 2024. Proposals are accepted …
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JGI@25: The Little Alga That Could
… at the lab relegated the experimental scientist to library research for three months. While reading up on … not. When the lab reopened, Merchant would go on to work on research that identified signaling pathways in … the Chlamydomonas genome in the early-2000s. She and other researchers came together for what was then called a JGI …
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