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Insights of biomass recalcitrance in natural Populus trichocarpa variants for biomass conversion
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … the microbes in and on humans shape our health. A total of 16 projects have been approved, divided among the following … and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for …
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Uncovering Novel Genomes from Earth’s Microbiomes
… 44%, is now available and  described November 9, 2020 in  Nature Biotechnology . Known as the GEM (Genomes from … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and the  DOE …
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Marine Microbe Contains Multitudes
… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI …
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An Automated Tool for Assessing Virus Data Quality
… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … of contamination from the host organism. As reported in Nature Biotechnology , a team from the U.S. Department of … to over 2.4 million viral genomes available in the latest release of IMG/VR . CheckV is freely available for download …
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Len Pennacchio
DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously … of the tree of life. A senior scientist at Lawrence Berkeley National Laboratory (Berkeley Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … genetic pathways and biosystems. It The program fosters collaboration with U.S. and international scientists to drive … for their ability to produce desired chemicals. … The JGI's DNA Synthesis Science Group supports researchers …
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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts
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Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … used to map their routes had been taken. Sifting through 16 Trillion Bases of DNA Taking into consideration some … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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