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Nigel Mouncey
… the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … the highest quality operational effectiveness of production sequencing, provides health and safety oversight at the JGI, … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … roles in carbon and other nutrient cycles. “This is the first study to take a more global look at giant viruses by … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … run in such highly parallel infrastructures.”  This is the first time protein structures have been used to help …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Draft Genome Sequences of Three Strains of a Novel Rhizobiales Species Isolated from Forest Soil
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … (Berkeley Lab), has generated a more accurate phylogenetic tree tracking the evolution of  Dothideomycetes fungi. The  … supported by the NSF grants  DEB-1354625 and  IOS-1456958 . Sequencing of  Dothideomycetes genomes were conducted as …
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