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Isolation and sequencing of a single copy of an introgressed chromosome from a complex genome for gene and SNP identification
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Simon Roux
… Selected Publications …
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An Automated Tool for Assessing Virus Data Quality
… and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the … of these viruses and associate them with their microbial hosts. However, assembling viral genomes from metagenomes is … perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps …
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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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DAS Tool for Genome Reconstruction from Metagenomes
… and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … and characterizing entire microbial genomes from sequences generated from environmental samples. The work aligns with … lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and soil from …
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Discovery and annotation of small proteins using genomics, proteomics, and computational approaches
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities
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Discovery, Design, and Structural Characterization of Alkane-Producing Enzymes across the Ferritin-like Superfamily
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Learning to Look
… As their small genomes can be easily manipulated through genetic engineering, inoviruses are used for several … now overhauls our perception of this virus group – from minor curiosities they become a prominent component of … that genetic neighborhood. So anti-CRISPR loci are powerful discovery tools, by finding even one new anti-CRISPR locus, …
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Better Genome Editing for Bioenergy
… The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA … Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the …
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Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern
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