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JGI@25: Strengthening Soybean
… Fungal Datasets …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …
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Making a Lichen Together
… in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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JGI Scientists Pen Genome Watch Articles
… Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … the human genome. Today, the Sanger Institute focuses on genomics to understand human and pathogen biology. Du Toit … researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … processed 13,700 metabolomics samples With our users, 247 publications were published   … milestones  completed . Our new Strategic Plan,  Innovating Genomics to Serve the Changing Planet , was released in …
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A Plant Root Atlas for Tracking Developmental Trajectories
… with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences …
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Boosting Small Molecule Production in Super “Soup”
… fact in the field whatsoever.” Focusing on Carbon Flux and Future Directions The team reported producing BDO at the … one of these things that we’re really excited about in the future, to see if that’s possible.” Alper and Jewett noted … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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