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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … , 2022 DeMirci et al. Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases., ACS Central Science … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … three times the size of the human genome. There are four more fern genomes in progress. One unique aspect of …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … because they aren’t similar to anything we’ve already defined.  “A huge percentage — around 30–50% of the protein … diversity has doubled, but in reality it could be three or four or five or tenfold more out there.” Digging Further …
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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast … … About the Deputy of Genomic Technologies … Selected Publications … Awards and Honors …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: …
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2024 Progress Report
… processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … Planet , was released in April. It centers our work on four strategic themes: Nutrient Cycling, Functional … The JGI  partnered  with synchrotron user facilities to define the structure and function of a unique cyanobacterial …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed … function-driven genomics, which Woyke and her colleagues define as “any form of functional enrichment leading to the …
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