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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… species? Or, do they tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew culturing, …
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Toward More Efficient Artificial Photosynthesis
… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … to convert them into energy that is then stored. A team led by researchers at the Max Planck Institute (MPI) for … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular … at Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Google Scholar … Education … Awards and Service … Selected Publications …
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines …
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Exploring the Structural, Biochemical, and Functional Diversity of Glycoside Hydrolase Family 12 from Penicillium subrubescens
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UC Merced Interns Reflect on Their JGI Summer Projects
… skills as well as build their network in the field of genomics and scientific research. The topics students worked … more about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The … out the short videos highlighting the exciting work done by the 2020 cohort of JGI-UC Merced interns .   by: Ashleigh …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of … specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of …
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JGI@25: Using Team Science to Build Communities Around Data
… in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … functions across different forests. Primary metabolism, cell activity, and fungal development looked quite alike for … that both guilds express similar genes for degrading fungal cell walls, the so-called fungal necromass, suggesting these …
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