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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome … of the JGI is to provide the global research community with access to the most advanced integrative genome science …
Learn more
An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … the building blocks of many of our fuels and materials.  With an eye to harnessing these nitrogenase-like enzymes, … how such inter-Facility collaborations through the Genomes to Structure and Function focus area of the JGI’s …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … earlier this year. And today we have our conversation with Professor Alison Narayan, from the University of Michigan. I … Dan and Jackie talk to Alison Narayan , from the University of Michigan’s Life Sciences Institute and Department of …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … root cells. The fungus is almost always found among and within poplar trees, and in an effort to understand its … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … methodologies developed for natural languages to study genomes,” Wang explained.  And since microbial genomes are … language of biology — and primed for integration with artificial intelligence tools.  LLMs aren’t just for …
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Emiley Eloe-Fadrosh
… Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted her … Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome Science …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during … School of Natural Sciences since 2015. Prospective users with specific questions regarding their proposed research … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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