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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also … of genomic DNA at DSMZ for GEBA-Actino and similar projects.       … The U.S. Department of Energy Joint Genome …
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The endosymbiotic box of protective tricks
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Fungus Fuels Tree Growth
… found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in plant … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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Better Genome Editing for Bioenergy
… goal of producing sustainable fuels from alternative sources. Moreover, the team says the approach they used to … to legend, Abraham Lincoln once said, “Give me six hours to chop down a tree and I will spend the first four … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic … across the species. These are primarily tetraploids (4X or four copies of the genome) and octoploids (8X or eight copies … variations between the common gardens, indicating a generalist (8X)-specialist (4X) tradeoff. Furthermore, niche …
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JGI User Executive Committee Expands
… environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on …
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How Microbes Can Protect Plants in Drier Straits
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Marcel Huntemann
… exchange and assists with large scale computations on R&D projects. …
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … and multicellular development. “DAP-Seq is the main source of information in the project,” Nagy added. “Since the …
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Triggering Morel Fruiting
… is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … mechanisms of morel with multi-omic approaches, our results revealed a striking capability of morel mycelium …
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Matthew Kellom
… interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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