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… being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … microbial hosts. However, assembling viral genomes from metagenomes is challenging and often results in highly …

… recycling the abundant miscellanea of their surroundings. Case in point: for us, the smell of the ocean simply signals … ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …

… sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … Lab), through the JGI Community Science Program . The metagenomes were also processed using the JGI-developed … Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, metatranscriptomes and single cell genomes, …

… of search in microbial and metagenomic databases. In this case, the machine “learned” to identify a certain type of … microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply getting much … with other co-infecting phages and with the host’s CRISPR-Cas immunity systems. Countering Co-Infections, …

… and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos … Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor Miguel Romero, … at the JGI, I’ve been studying mobile genetic elements and CRISPR spacers in the conifer needle microbiome, and I’ve …