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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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2025 NeLLi Symposium
Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a continuation of the previous …
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … model and track the forest recovery process.  Summary Most studies on post-wildfire soil microbiomes have focused on …
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Betsy Read
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … found only in the archaeal lineage Euryarchaeota; recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … researchers can develop high-throughput and high-resolution studies of interactions between host cells and viruses in …
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  … prone, which limits the size and complexity of research studies that use SIP. Researchers at Lawrence Livermore …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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