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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … study DNA methylation, which gives clues to how an organism may tune gene expression; and investigate corresponding …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … and mentors Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors Simon Roux and … And we’ve been working on isolating and cultivating and sequencing extremophile protists from a hypersaline alkaline …
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Operating Expenses
… Research (BER), a program within the DOE Office of Science. …
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Open Frameworks Training the Next Generation of Scientists
… provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of faculty and … provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … efforts to ensure the JGI’s integration into the Biosciences Area, the successful recruitment of a new JGI … Bevatron site. Ray knew, he said, “when to be firm on the science requirements and when to be forgiving when need be …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor … DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to establish the … of the evolution and selection of this gene family may help researchers manipulate TPS genes to increase …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate the characterization of … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part …
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Styling for Safety: PPE, It’s the JGI Way
… injuries and illnesses. These injuries and illnesses may result from contact with chemical, biological, physical, … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within … environments. It also shows how environmental conditions may affect metabolic activity of microbiomes. This is key … is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental Research …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … drive a strong bioeconomy. Summary Through the Community Science Program of the U.S. Department of Energy (DOE) Joint … for three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research …
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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A Complex Confection Decoded: Sugarcane Reference Genome
… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … . The work led by researchers at Australia’s national science agency CSIRO, the French Agricultural Research … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …
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