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Informatics Advisory Committee
… management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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JGI@25
… our collaborations and capabilities to enable great science that will help solve energy and environmental …
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Nick Everson
… and leadership of JGI operations infrastructure, including space and facilities, finance and procurement, human … Haas School of Business Served as a reviewer for DOE’s Science & Operations Peer Review of the Center for …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… and nutrients. In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils … to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … are there.  ALISON:  Those invertebrate species include mayflies and the caddisflies, which are of keen interest to … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Tanja Woyke Elected to American Academy of Microbiology
Genomics and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as … One example, published in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from … (NCLDV) supergroup. As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … by collecting samples from Yellowstone’s hot springs, an extreme environment with low genetic diversity that would … methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to studying …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who … (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. …
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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative between … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Extracting the Secrets of Secondary Metabolites
… helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to characterize following a … CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… our collaborations and capabilities to enable great science that will help solve energy and environmental … reference genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of …
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