Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
Results
RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
Engineering a Synthetic Escherichia coli Coculture for Compartmentalized de novo Biosynthesis of Isobutyl Butyrate from Mixed Sugars
Discovery of enzymes for toluene synthesis from anoxic microbial communities
Insights of biomass recalcitrance in natural Populus trichocarpa variants for biomass conversion
Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities
JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
The mitochondrial genome of the ethanol-metabolizing, wine cellar mold Zasmidium cellare is the smallest for a filamentous ascomycete
Improved genome annotation for Zymomonas mobilis
Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience
ClaMS: A Classifier for Metagenomic Sequences
Development of a thermophilic coculture for corn fiber conversion to ethanol