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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … Harnessing the collective power of more than 26,000 microbiome datasets, all accessible through the publicly … — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing something interesting …
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Alabama A&M Interns Access An Abundance of Knowledge
… DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI … of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching workshops … to a DMD to a PhD program. LaMonika Dent : I hope to gain hands-on experience in molecular biology and plant …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the … minorities in science, technology, engineering and math (STEM) fields. More than 20 UC Merced students have … serves as the graduate student president of the Women in STEM campus organization and is involved with multiple …
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Kjiersten Fagnan
… with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused … head.  Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she leads infrastructure …
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MGM Workshop at Fisabio Summer School 2026
… School.  The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … of theoretical lectures and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. … of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha Seshadri and Mateus Fiamenghi from …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are … students receive training in laboratory techniques through hands-on experiments and data analysis. Starting with …
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