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When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the …

… from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech Partners, a … development experiences that increase participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this summer. …

Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships … the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude …

JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods for …

… the 1000 Fungal Genomes Project, which aims to provide a reference genome for each of the fungal families. … genome data from newly sequenced genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data …

Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … might be added to the water along the way, impacting its quality and in turn affecting environmental and human … systems to monitor for and identify land use or water quality changes. Summary Rivers are key components of …

… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for which there were previously no genomes of symbiotic species available: 73 saprotrophs and …

… traits. Dr. Mouncey has successfully built integrated and highly effective multi-disciplinary teams, and today, … external collaborations. The Director ensures the highest quality operational effectiveness of production sequencing, … the Genomic Encyclopedia of Actinobacteria with 824 Isolate Reference Genomes. Cell Genomics 2: 100213Nayfach S et al. …

… known as “Chlamy” to those who study it) a powerful reference organism for studying photosynthesis and cell … (23.8%) of publications focused on that specific algae. The reference genome is cited in roughly 10% of all … impact. Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional …

… and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … what has typically been associated with viruses, while the genomes of large viruses may be only 10 times larger. And … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… list is available on Google Scholar . … ALE , assembly quality evaluation software based on Bayesian statistics …