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Deforestation impacts network co-occurrence patterns of microbial communities in Amazon soils
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative …
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Building Sphagnum Genomic Resources
… estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can also act as a … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … the Austrian Science Fund (FWF, P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP 605), the German …
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Ken Chu
… of analytical tools and user interface components for the IMG family of systems. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … together, they found most bacterial genomes from water and soil communities were at least 80% complete when studied … Award, NIH Director’s New Innovator Award (7DP2CA239145), and Burroughs Wellcome Career Award for Medical …
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Triggering Morel Fruiting
Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying … fruiting bodies of morel in walk-in growth chambers in 1980s. Unfortunately, he died suddenly, and his patent has …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the …
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Interactions between plants and soil shaping the root microbiome under abiotic stress
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A novel method to evaluate nutrient retention by biological soil crust exopolymeric matrix
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Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
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The Source and Evolutionary History of a Microbial Contaminant Identified Through Soil Metagenomic Analysis
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Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow
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