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In April 2020, we mark both the 50th celebration of Earth … University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial … its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a more global …

Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …

… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature Biotechnology  called geNomad identifies and … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …

Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  … to reach that maximum with broader questions and broader project scope? A: Focus on strong science and well-thought-out questions. We are looking for projects that can’t easily be done at a core facility, but …

Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary …

The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …

Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep learning for …

… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … four genes, including one with no prior known function. The project’s success demonstrates how to sharpen the …

For the first time in several years, the DOE Joint Genome Institute hosted … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … to work on fungal genomics and the fact that I got to do a project involving over 12,000 fungal genomes was just …

The Integrative Genomics Building (IGB) seen above is home to … (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We …

… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … Your ethics always point due north.” Joe Harkins served as project lead on the new building that would eventually rise …

Harnessing BER-funded data resources, researchers built an … (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an interactive browser that … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …