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… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … Atlas and PPRD could help with understanding gene functional roles, but the experimental inconsistency makes …

… manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … several points in time to assess nutrient concentration and cell death. Immediately upon transfer, the experimental … salinity changes led the algae to express genes involved in freezing resistance, adapting to cold temperatures and …

… soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … with previous studies in the same system. With the right functional characterization, those genes could become dials …

… was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her primary interest and …

… genetics that started with his education and carried forward into his roles as a senior research scientist at … include strategic planning and ensuring program excellence. The Director represents the JGI to its various … international forums. Breaking the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and …

Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became … Crete, Greece … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . … global RNA virome reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. …

… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.       Despite advances in … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the …

Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … — so researchers can easily explore the evolutionary and functional relationships among the different algae. …

… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … extensive structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant … Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. …

… cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these … through the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once more with …