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Waiting to Respire
… ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… rely on enzymes that have been evolving for billions of years. However, these enzymes are often loosely understood, … fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified across … that even enzymes that evolved separately for billions of years have some common signatures of muli-substrate …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, … oxidation metabolisms. They also identified a set of 38 marker genes that serve as a core set of genes present in …
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A Community Resource for Secondary Metabolite Researchers
… expediting BGC and biosynthesis research.  Summary Over the years several secondary metabolites databases have been made …
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Tracing the Evolution of Shiitake Mushrooms
… of Lentinula species.The Lentinula genus diverged roughly 28 million years ago, when the largest mammal ever, Paraceratherium, … … This research was supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy …
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When “The Blob” Made It Hotter Under the Water
United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures by a few …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act … … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  https://doi.org/10.46936/10.25585/60007554 ) conducted by the U.S. Department of Energy …
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Ancient Algae Reveal Secrets of Plant Evolution
… that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ … the United States Department of Agriculture (USDA) award (58-8042-9–089), the National Institutes of Health (NIH) awards …
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JGI@25: From Life at the Extremes to Editing Genomes
… other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins … 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction by …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of …
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JGI@25: Using Team Science to Build Communities Around Data
The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. … collaborators and co-authors with affiliations at over 180 organizations in 29 U.S. states and 35 countries. Of the … has “significantly advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic …
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