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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… networking opportunities and fosters discussions on how to capture and characterize viral diversity, understand … and large-scale data analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was one of the eight JGI …
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JGI@25: Stories from Intern Alumni
… we’ll be revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great … Ho, Maria Mendoza, Erone Cao and Sabah Ul-Hasan share how these experiences have influenced their career journeys. …
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JGI-USCCN Strain Sequencing Opportunity
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… collaboration.  JGI Director Nigel Mouncey reflected on how the JGI-UC Merced Intern partnership had become a … and alumni shared their perspectives on the program and how much it meant to be a part of it all. Among them was … , a JGI research scientist and program mentor, discussed how “advocating and listening to the interns and learning …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… we caught up with JGI staff, collaborators and users to see how software and supercomputing capabilities have evolved to … for over 20 years in order to better understand how the freshwater ecosystem works. When she set out to … program MetaHipMer2. Part 3: Boating Out to David Buoy — How did the mega dataset from Lake Mendota come together? We …
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A Sorghum Pangenome Opens More Doors to Discovery
… into drought tolerance, biomass production and more — however, a single reference genome shows only one slice of the adaptation possible for this … than a discovery in itself, this pangenome is a tool. It shows genetic variation across sorghum varieties from a much …
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SPRUCE-ing Up Science
… and Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … that normally would kill the moss may hold clues to how these carbon sink environments can continue to hold onto … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… deep subsurface ecosystems. A team of researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – and how the  microbes resist. The battle waged below the Earth’s … National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… Laboratory, is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant … to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the stomachs of …
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JGIota: Sequencing Shiitakes with David Hibbett
… week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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