Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Results
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa
The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
Genome-scale phylogeny and comparative genomics of the fungal order Sordariales
Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
Host genotype controls ecological change in the leaf fungal microbiome
A Genome-Wide Survey of Switchgrass Genome Structure and Organization
The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
