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Trent Northen
… in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … Lab Director Exceptional Achievement Award 2014 DOE Early Career Award 2013 R&D100 Award 2009 Presidential Award …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of … decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat bogs also serve the …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … regions (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer …
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The Expanding Universe of Methane Metabolisms in Archaea
… of methanogenesis and the presence of methanogens in nearly all types of anaerobic environments suggest the … database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits. Nature Commun . …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …
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Gut Fungi: Unexpected Source of Novel Chemicals
In their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — just … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … terrestrial carbon is stored in peatlands, which make up nearly 3 percent of the earth’s land surface. In the New … establishment and maintenance is supported by the US DOE, Office of Science, Office of Biological and …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods SynTrack and …
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