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… his team then linked those species-level observations with data on microalgal communities across different ocean … from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing … The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the …

… of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …

By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … visit  energy.gov/science/office-science . … Virophage data on IMG/M data portal …

… genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that … of the opportunity. “I’m getting a picture of the amount of data that’s going to be generated at academic level in a few …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive …

… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) … of Science User Facility, for publicly available metagenome data provided by the other study co-authors, and … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis …

Database provides details on river microbes in 90% of US … Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering … The 3.8 trillion bases or Terabases of sequencing data, along with geochemical and geospatial measurements …

… , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome … being monitored and the team plans to continue collecting data to understand the ERD process.  … The work (proposal:  …

D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … energy.gov/science/office-science . … Cotton on Phytozome Data Portal …

… by a fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. …

I really hope to gain laboratory experience working with tools as well as laboratory machines in hopes of …

… months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … ” Anna Kucherova : “I got to learn about skills and tools that I’d never done before from my mentors. Also, …