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Methane Makers in Yosemite’s Lakes
… (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. … are isolated, but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … fundamentally meaningful given its relevance to the global climate change crisis. And, it’s an opportunity to … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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The endosymbiotic box of protective tricks
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind … to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, … could ultimately help preserve peat bogs in the wake of climate change. Researchers at the U.S. Department of Energy …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … information has allowed the research team to associate climate adaptations with switchgrass biology, information … fellow in the Juenger lab and continues to work on the project from a lab at Michigan State University that is …
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Science Programs
… their expertise to enhance the scientific impact of user projects, develop cutting edge approaches for and with users, and create … Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE science mission. …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … (IMG/M) suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a total of 44,652 complete …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … factors bind in the genome. A key aspect of the project is understanding what TFs and regulatory networks …
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