Results
… EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer): The more the better. We … least a microgram of DNA in the tube so you’d need at least 2 micrograms in the sample to start with. 2. Q: What would a …
Learn more
… and bioinformatics facilitates impactful scientific discoveries, supporting the DOE’s Biological and … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. …
Learn more
… to curate and cultivate what is still unknown. “We took a deep dive into over 1.8 million bacterial and archaeal … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … the number of cultured isolates. If you’re interested in learning more, fill out this survey . …
Learn more
… poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … Bushley of the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how … Queens University aims a multi-omics approach toward generating “with unprecedented precision” the gene …
Learn more
… limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing … provides a robust community dataset of improved quality; deep insights identify the most important binding sites by … More specifically, it’s enabled several scientific discoveries that are key to understanding how to engineer …
Learn more
… JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … Q: How many PacBio metagenomes can I submit? How deeply are metagenomes sequenced? A: For the next call ( … of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). Methylation detection currently only …
Learn more
