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… UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We … the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, Stephan …

… ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae … feedstocks that can thrive in saltwater mitigates concerns about diverting resources such as arable land and fresh … to various stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … Watch the short video here to see what they had to say about their experiences and what they’ll take with them as … summer projects. Each intern also mentioned what they loved about their internship. Efosa Omorogieva : “The entire …

… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial … on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …

… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, … system to study virus-host interactions. Approximately 150 archaeal viruses had been previously identified. The JGI …

… Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team … specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …

… sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the … move preparations, the JGI has released its newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for … prospective partners to generate awareness of and clarity about the JGI’s strategic directions,” said Mouncey. “In …

…   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and … wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …

… sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. … cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through … Lax, Carlos, Stephen J. Mondo, José F. Martínez, Anna Muszewska, Leo A. Baumgart, José A. Pérez-Ruiz, Pablo …

… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, … and that’s one of these things that we’re really excited about in the future, to see if that’s possible.” Alper and …